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Daily arXiv Papers

Graph Learning · LLM × Graph · Multi-Agent · Science

Showing 30 papers for 2026-08-26

★ Must read

full paper read, not just the abstract

Nothing cleared the bar today. Papers read in full today: 11.

◇ Potentially interesting

read in full, rated just below must-read — your call
Department of Mathematics, University of Maryland, College Park · Human Language Technology Center of Excellence (HLTCOE), Johns Hopkins University

The load-bearing idea is real rather than a new GNN-style wrapper: shared continuous latent positions provide identifiable heterogeneity even when corresponding edges carry zero correlation, and the proof turns uniform OOS embedding error plus latent-point separation into perfect matching. The text does test the no-edge-correlation premise in RDPG simulations and shows that matching can restore power for shuffled graph tests, but its strongest practical variant (λ=0.5) is not the variant analyzed, and it is often nearly indistinguishable from the much simpler Procrustes baseline (ProcMatch).

The exact-recovery theorem is narrow—fixed-dimensional continuous, well-separated RDPGs with identical latent positions and a restrictive seed/unseeded scaling—and the experimental baseline set omits modern uncorrelated latent/graphon-matching competitors.

Department of Mathematical Sciences, Politecnico di Torino · Department of Computer Science, University of Oxford

The load-bearing contribution is the effective-distance criterion on the bridge/2-edge-connected-component condensation tree: after gathering free vertices into a pivot-adapted configuration, a tasked agent can reach a pivot iff the number of holes meets this effective distance. Together with the 2-edge-connected guarantee and single-pivot NP-hardness reduction, this is a meaningful structural account of when intermediate-resource access is feasible. The supplied text gives substantial constructive proofs, but it stops during the flowtime-hardness proof and contains no experimental section, so it does not let us verify the advertised 74–89% PPP success rate, orders-of-magnitude claim, baseline tuning, or whether PPP's pivot-prioritization is materially better than standard prioritized planning plus assignment.

The strongest result is tailored to a narrow one-shot, single-type interchangeable-pivot model, while the empirical algorithmic claims are uncheckable from the supplied incomplete text.

All papers

28
From Causal Plausibility to Causal Reliability: Evaluating LLMs as Calibrated Direct Causal-Edge Classifiers
Knowledge Graph

We systematically evaluate 12 instruction-tuned open-weight LLMs on direct causal-edge judgments across six benchmark graphs, testing six prompts and four confidence signals (verbalized, logit-based, cross-prompt, cross-model). We find that LLMs offer calibrated but not fully reliable causal judgments; consistency across prompts and models helps, but trust remains conditional on the confidence source.

GNNBleed: Inference Attacks to Unveil Private Edges in Graphs with Realistic Access to GNN Models
GNN Graph Learning

GNNBleed analyzes inference attacks that reveal private edges in graphs under realistic access to GNN models. It demonstrates how model outputs can leak edge information and discusses potential mitigations to protect edge privacy.

Matched Excess-Outranker Regularization for Candidate-Set Interference in Continual Knowledge Graph Embedding
Knowledge Graph Graph Learning

MEOR formalizes candidate-set interference in continual KG embedding and introduces a host-level regularization that matches newcomer pressure with answer-relative excess outranking, preserving historical answer rankings when new entities join.

Graph-dependent shrinkage priors for Bayesian trend filtering
Graph Learning Graph Theory

The article introduces graph-dependent shrinkage priors for Bayesian trend filtering to better capture dependencies encoded by graphs. It argues that classical trend filtering is brittle with missing data and lacks uncertainty quantification, and proposes graph-aware priors to improve smoothing, robustness, and uncertainty assessment.

Cross-Domain, Multi-Task Data-to-Text Generation without In-Domain Training Data
Knowledge Graph

This study tackles cross-domain data-to-text generation without in-domain training data. It analyzes how to perform multi-task D2T generation across diverse data forms (tables, knowledge graphs, charts, time series) without domain-specific training text or references, leveraging zero-shot and generalizable methods.

Multi-Source Complex Network Reconstruction via Wasserstein Distributionally Robust Optimization and Algorithm Unrolling
Graph Learning Graph Theory

We tackle complex network reconstruction from heterogeneous sources using Wasserstein distributionally robust optimization and algorithm unrolling. By matching distributions across sources, the method robustly fuses data to reconstruct networks without being biased by source divergence.

Generating Intervention Hypotheses using Explainable Explanations on Graphs: G2I, a Two-Stage Greedy Framework
Graph Learning GNN

G2I proposes a two-stage greedy framework that leverages explainable explanations on graphs to generate intervention hypotheses from predictions. It moves beyond node-level explanations by producing network-level interventions and demonstrates improvements in actionable hypotheses for public health and social science decisions.

Equivariant Cellular Sheaves for Molecular Electronic Structure: Bridging Sheaf Cohomology and E(3)-Equivariant Hamiltonian Learning
Graph × Science

We show that, in a localized atomic-orbital basis, the molecular single-particle Hamiltonian (after a shift to make it positive semidefinite) is the Laplacian of a cellular sheaf on a regular cell complex built from the molecular graph. This reveals a structural connection between E(3)-equivariant Hamiltonian learning and sheaf cohomology, enabling new equivariant learning architectures for electronic structure.

Constrained Entity Selection under Partial Knowledge for LLM-Based Knowledge Graph QA
Knowledge Graph LLM × Graph

We study KGQA where LLM-grounded answers must be grounded to a KG under partial knowledge; propose a constrained entity-selection approach that enforces grounding constraints to improve answer accuracy even when the KG is incomplete.

Quantum Maximum Entropy Inference and Hamiltonian Learning
Graph Learning Graph Theory

Quantum maximum entropy inference extends GIS and gradient-descent-based learning to quantum graphical models, addressing non-commutativity. The paper introduces quantum iterative scaling (QIS) and analyzes convergence, providing algorithms to perform maximum-entropy inference and Hamiltonian learning in quantum settings.

FlowNeg: GFlowNet-Guided Diverse Hard Negative Sampling for Knowledge Graph Embedding
Knowledge Graph

FlowNeg introduces a FlowNet-based, context-conditioned hierarchical generative model to sample hard negatives for knowledge graph embeddings. Given a positive triple and a corruption context, it selects the corruption type and entity to produce diverse, informative negatives without needing to normalize over all entities, improving learning efficiency and quality.

TaLK: Text-attributed Graph Dataset Distillation via Coupling Language Model with Graph-Aware Kernel
Graph Learning GNN

TaLK distills text-attributed graph datasets by coupling a language model with a graph-aware kernel, enabling efficient dataset distillation for TAGs. The method reduces training costs while preserving key semantic and structural information for downstream tasks.

Optimizing Expert-Designed Crystal Graph Networks for Band-Gap Prediction with an Autonomous LLM Research Loop
Graph × Science GNN

Using autonomous LLM research loop, the paper has an expert-designed crystal graph network for band-gap prediction, with an autonomous coding agent that designs and trains the model on MatBench; achieves strong results without external pretraining.

Do Recipes Have Personas? Characterizing and Generating Creator Style in Attributed Procedural Graphs
Graph Learning

We construct ViralRecipesTrans, a dataset of procedurally aligned execution-flow graphs extracted from cooking videos and mapped to creators; we formalize procedural style metrics and investigate how to discover and generate creator-style procedural graphs.

MolGA: Molecular Graph Adaptation with Pre-trained 2D Graph Encoder
Graph × Science GNN

MolGA studies adapting pre-trained 2D graph encoders to molecules by incorporating rich submolecular knowledge (atoms, bonds). It proposes a flexible adaptation framework that combines pretrained encoders with domain knowledge to improve molecular property prediction and generalization across molecular domains.

Panning for Gold: Expanding Domain-Specific Knowledge Graphs with General Knowledge
Knowledge Graph Graph Learning

Domain-specific knowledge graphs (DKGs) often suffer from limited coverage and quality compared with General Knowledge Graphs (GKGs). This work investigates how high-quality GKGs can be systematically leveraged to supplement DKGs, addressing coverage gaps and enrichment opportunities.

Ollivier-Ricci Curvature of Riemannian Manifolds and Directed Graphs with Applications to Graph Neural Networks
Graph Theory GNN

This thesis/exposition surveys Ollivier-Ricci curvature for metric spaces and connects it to classical Ricci curvature via 1-Wasserstein distance and optimal transport. It covers key results and proofs, including extensions to graphs (Lin–Lu–Yau) and implications for graph neural networks.

MGQL: An Executable, Small-Step Semantics of GQL
Graph Theory

MGQL provides executable, small-step semantics for Graph Query Language (GQL) to support rigorous reasoning about the ISO standard. It preserves features like bag semantics, schemas, and multi-graph queries, enabling faithful implementation and verification.

Conditional GraphGANFed: Optimizing Graph-Structured Molecule Generation in Federated Generative Adversarial Networks
Graph × Science

We extend GraphGANFed to enable conditioning on user-defined objectives in a federated setting, allowing generation of graph-structured molecules that optimize specified metrics while preserving data privacy. The approach blends conditional graph generation with federated learning to tailor molecular design without sharing raw data.

LION: A Clifford Neural Paradigm for Multimodal-Attributed Graph Learning
Graph Learning GNN

LION introduces a Clifford neural paradigm for multimodal-attributed graphs, leveraging geometric algebra to fuse topology and multiple modalities in a principled way. The approach improves representation and downstream task performance by better aligning contextual information across modalities within graphs.

Adaptive Influence Graphs for Failure Attribution in Multi-Agent Systems
Graph Learning Multi-Agent

We propose Adaptive Influence Graphs to attribute failures in multi-agent LLM systems by organizing observability traces around components, actions, and dependencies; the approach enables targeted debugging and improves failure localization using LLMs.

FedV-KGQA: Multi-Hop Question Answering over Vertically Partitioned Knowledge Graphs
Knowledge Graph Graph Learning

FedV-KGQA enables multi-hop question answering over vertically partitioned KGs in a federated setting by sharing entities while keeping relation subsets local. It combines local graph enrichment and KG embeddings to support cross-organizational multi-hop reasoning without centralized data sharing.

Denoising the Future: Context-Aware Spectral Diffusion for Temporal Knowledge Graph Extrapolation
Knowledge Graph Graph Learning

We propose FreqDiff, a Frequency-aware Diffusion framework for temporal knowledge graph extrapolation. It addresses the issue that conditioning on subject histories can obscure query-specific evidence, by incorporating frequency-aware conditioning to better isolate signals relevant to forecasting future facts.

A Tale of Two Graphs: Separating Knowledge Exploration from Outline Structure for Open-Ended Deep Research
Graph Theory Multi-Agent

Open-Ended Deep Research (OEDR) agents often struggle with long-horizon tasks. This work advocates separating knowledge exploration from outline structure using two graphs, providing explicit supervision for discovering missing relations and triggers to improve long-horizon research workflows.

GATNextHop: A GAT for Shortest Path Routing with Cross-Topology Generalization
GNN Graph Theory

GATNextHop studies whether a Graph Attention Network can approximate shortest-path routing and generalize across network topologies. Trained on synthetic graphs and tested on real ISP-topology graphs, it benchmarks the GNN’s ability to predict next hops and generalize SPF decisions beyond the training topology.

Don't Just Listen, Try Planning: Graph-based Retrieval-Generation Agent for Long-form Audio Meeting Understanding
Graph Learning

The paper targets long-form audio meeting understanding (LAMU) by identifying limitations in current speech QA and memory. It introduces LongAudioQA and GRGA, a graph-based model that encodes heterogeneous audio features into a multi-dimensional graph, and uses agent planning to retrieve relevant information and generate answers to improve handling of long-range context.

Balancing Safety and Optimality in Robot Path Planning: Algorithm and Metric
Graph Theory

The paper presents the Unified Path Planner (UPP), a graph-search algorithm that dynamically balances safety and optimality via adaptive heuristic weighting. It uses a local inverse-distance safety field and auto-tunes parameters during search to maintain bounded heuristics while achieving superior obstacle clearance, enabling rigorous evaluation of safety-optimality trade-offs.

Molecular LLM Agents: From Architectural Design to Scientific Autonomy
Graph × Science Multi-Agent

Molecular LLM Agents examine how to build LLM-driven agents capable of perceiving and acting upon molecular objects across strings, graphs, 3D conformations, spectra, simulations, and wet-lab data. The work outlines an architectural framework for molecular agents, emphasizing perception, domain-specific tool grounding, and feedback loops to enable scientific autonomy.