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Showing 19 papers for 2026-08-10

MiGHT-EHR: A Multi-task Graph Transformer for Heterogeneous Temporal Electronic Health Records
GNN Graph Learning

MiGHT-EHR introduces a multi-task graph transformer designed for heterogeneous temporal EHRs. It models multiple entity types (patients, visits, diagnoses, prescriptions, procedures) and their temporal interactions to enable joint predictions across tasks. It captures longitudinal trajectories and cross-entity dependencies to improve clinical prediction.

SNI-GNN: SmartNIC-Assisted Full-Graph GNN Training with In-Network Embedding Prediction
GNN Graph Learning

We present SNI-GNN, a SmartNIC-assisted full-graph training system for GNNs. It reduces inter-node embedding communication by predicting remote embeddings in-network using a lightweight predictor on SmartNICs, and couples an importance-based boundary-node sampling with an asynchronous DPU–GPU data pipeline and intermediate-result reuse. The approach preserves accuracy while achieving better scalability on multi-server clusters.

Accounting Graph Transformer for Short-History Multi-KPI Forecasting in Small Businesses
GNN Graph Learning

Accounting Graph Transformer (AGT) enables joint 12-month forecasting of 13 KPIs from 71 monthly ledger series in small businesses with short histories. Each ledger series is represented as a masked token and information is exchanged via a fixed accounting-relations graph using typed attention, with target-specific context pooled for accurate forecasts.

Edge Sparsification via Temporal Forman-Ricci Curvature for Dynamic Graph Learning
Graph Learning Graph Theory

TRicci provides edge sparsification for dynamic graphs using Temporal Forman-Ricci curvature. It extends Forman-Ricci curvature to dynamic networks to guide which edges to drop while preserving essential structure for learning. This reduces computation in dense, rapidly evolving graphs without severely sacrificing performance.

When GNNs Fail: Quantifying and Overcoming Temporal Correlation Volatility in Time Series
GNN Graph Learning

The paper analyzes GNN-based forecasting where time-series are nodes and edges are pairwise temporal correlations, comparing static graph assumptions versus dynamic correlations. It quantifies temporal correlation volatility and its impact on forecasting accuracy and proposes strategies to adapt GNNs to evolving graphs, improving robustness.

Beyond Co-Movement: Locality by Exposures Enables a Joint Factor-Graph Framework for Portfolio Diversification
Graph Learning Graph Theory

The paper introduces a joint factor-graph framework that uses locality by exposures to diversify portfolios. It combines traditional factor models with graph-based market structure, enabling allocations to be driven by underlying exposure networks rather than solely observed co-movements. This approach reduces vulnerability to idiosyncratic shocks.

MolBioKG: Grounding Out-of-Graph Molecules in Biomedical Knowledge Graphs via Multi-Resolution Structural Anchoring
Knowledge Graph Graph Learning

MolBioKG tackles out-of-graph molecules by grounding unseen molecules to biomedical evidence via multi-resolution anchoring. It connects an index of 2.74 million molecules (scaffolds, fragments, functional groups, fingerprints) to a 9.6-million-edge knowledge graph.

TMTE: Effective Multimodal Graph Learning with Task-aware Modality and Topology Co-evolution
Graph Learning Graph Theory

TMTE addresses multimodal attributed graphs with topology quality issues, proposing co-evolution of task-aware modalities and topology. It adapts modality contributions and graph structure in a task-driven manner to handle noisy or missing relations and improve downstream performance.

Cluster Attention for Graph Machine Learning
GNN Graph Learning

The paper introduces cluster attention to enlarge the effective receptive field without full global attention by partitioning the graph into clusters and applying attention within clusters. This yields scalable graph transformers with graph-structure biases and reduced computation, while preserving long-range dependencies.

Harnessing the Synergy between LLM Agents and Knowledge Graphs for Urban Socioeconomic Prediction
Knowledge Graph Graph Learning

The work studies combining LLM agents with knowledge graphs to predict urban socioeconomic indicators. LLMs provide reasoning and task-relevant knowledge while KGs supply structured data, reducing reliance on handcrafted features and improving predictive accuracy.

BDD2Seq: Enabling Scalable Reversible-Circuit Synthesis via Graph-to-Sequence Learning
Graph Learning

BDDs are used in reversible circuit synthesis; variable ordering is NP-hard. BDD2Seq uses graph-to-sequence learning to predict variable orderings, enabling scalable synthesis and more efficient quantum circuit design.

Transferable FB-GNN-MBE Framework for Potential Energy Surfaces: Data-Adaptive Transfer Learning in Deep Learned Many-Body Expansion Theory
GNN Graph Learning

Integrates fragment-based GNNs with many-body expansion to predict PES for large molecular systems. It introduces data-adaptive transfer learning to transfer knowledge across molecules, reproducing first-principles PES for large systems.

Towards Multi-Label Graph Foundation Models: from Single-Vector Representation Learning to Multi-Semantic Basis Learning
GNN Graph Learning

The paper proposes multi-label graph foundation models that enable transfer across graphs by moving beyond single-vector representations to multi-semantic basis learning. This enables cross-domain generalization for multi-label node classification.

Mind the Gap: A Dual Knowledge Graph Framework for Unified Multi-task User Intent Inference
Knowledge Graph Graph Learning

The paper proposes DKG-MTI, a dual knowledge graph framework for unified multi-task user intent inference from online travel reviews. It builds a User-Specific Intent KG and aligns it with a Global Hotel KG to improve inference while reducing error propagation.

ReGraph: Learning to Generate Recipe Graphs from Food Images
Graph Learning

ReGraph learns to generate recipe graphs from food images to capture structured procedural knowledge. By modeling ingredients, states, and actions as a graph, it provides a framework to assess whether models encode process-level knowledge in recipe generation.

Authoring and Management of Transparent Research Integrity Assessments of Randomised Clinical Trial Publications Using LLM-assisted Tools and Provenance Knowledge Graphs
Knowledge Graph Graph Learning

INSPECT-AI is an LLM-based interactive tool that assists human reviewers with research integrity assessments of RCT publications. It uses provenance knowledge graphs to document decisions, enabling transparency and reproducibility in systematic reviews.

Control-Anchored Residual Flow Matching Conditioned on Gene Geometry for Virtual Cell Perturbation Modeling
Graph Learning

The paper proposes a graph-based model that predicts single-cell transcriptional responses to unseen perturbations, anchored by gene geometry. It leverages network priors to avoid overfitting to perturbation-responsive pathways and emphasizes stable gene relationships in modeling.

An Agentic Hybrid Top-Down and Bottom-Up Approach to Knowledge Graph Generation
Knowledge Graph

The paper proposes a hybrid KG generation pipeline that grounds an LLM in Wikidata with multilingual coverage and uses an agentic reflexion pattern to synthesize emerging concepts and metadata. It balances top-down grounding with bottom-up expansion to build scalable, multilingual knowledge graphs.

A Physics-Inspired Classical Digital Twin of Cortical Dynamics: A Band-Stratified Metriplectic Port-Hamiltonian Neural Network Learned from Brain-Computer-Interface EEG
GNN

We present a physics-inspired digital twin for brain activity using a band-stratified metriplectic port-Hamiltonian neural network trained on EEG data. The port-Hamiltonian formulation enforces passivity and a power balance, offering robust modeling for BCI applications.